When you put the roof down one of the first thing that happens is the rear quarter windows drop down and say down.
When you raise the roof back up, as it nears the last stage then the rear quarters pop back up again.
If you interior the lower or raising sequence then everything gets confused – you can end up with the roof up and the quarter Windows still down. If this happens you should fully lower the roof and then raise it again.
As far as I know, you can’t raise the rear quarter Windows with the roof down